Diya – a universal light illumination platform for multiwell plate cultures.
                            
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                                CcaS/CcaR
                            
                                CRY2/CIB1
                            
                                EL222
                            
                                Magnets
                            
                                VVD
                            
                            
                                
                                    E. coli
                                
                            
                                
                                    HEK293T
                                
                            
                                
                                    HeLa
                                
                            
                                
                                    S. cerevisiae
                                
                            
                            
                                Transgene expression
                            
                            
                            
                            
                            
                        
                        
                        
                        
                            Abstract:
                            Recent progress in protein engineering has established optogenetics as one of the leading external non-invasive stimulation strategies, with many optogenetic tools being designed for in vivo operation. Characterization and optimization of these tools require a high-throughput and versatile light delivery system targeting micro-titer culture volumes. Here, we present a universal light illumination platform – Diya, compatible with a wide range of cell culture plates and dishes. Diya hosts specially-designed features ensuring active thermal management, homogeneous illumination, and minimal light bleedthrough. It offers light induction programming via a user-friendly custom-designed GUI. Through extensive characterization experiments with multiple optogenetic tools in diverse model organisms (bacteria, yeast and human cell lines), we show that Diya maintains viable conditions for cell cultures undergoing light induction. Finally, we demonstrate an optogenetic strategy for in vivo biomolecular controller operation. With a custom-designed antithetic integral feedback circuit, we exhibit robust perfect adaptation and light-controlled set-point variation using Diya.